Table 1 Collection dates, van-genotypes, MLST sequence types (all isolates) and antimicrobial resistance expression (only patient isolates) of VRE strains
Isolate no. | Collection date | van-genotype | MLST- ST | AMP | SAM | AX | AMC | PRL | TPZ | IPM | CIP | LEV | TEC | QD | TGC | LNZ | F | SXT | CN-HLR | S-HLR |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P1 | 2015–03-01 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | + | + |
P2 | 2015–03-18 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P3 | 2015–04-16 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P4 | 2015–04-26 | vanA | 117 | r | r | r | r | r | r | r | r | r | r | s | s | s | s | r | + | − |
P5 | 2015–05-01 | vanB | 80 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | − |
P6 | 2015–05-22 | vanA | 769 | r | r | r | r | r | r | r | r | r | r | s | s | s | s | r | − | + |
P7 | 2015–05-22 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P8 | 2015–05-23 | vanA | 769 | r | r | r | r | r | r | r | r | r | r | s | s | s | s | r | − | + |
P9 | 2015–05-23 | vanB | 117 | r | r | r | r | r | r | r | r | r | s | s | s | s | r | r | + | + |
P10 | 2015–05-23 | vanA + vanB | 17 | r | r | r | r | r | r | r | r | r | s | s | s | s | r | r | + | + |
P11 | 2015–05-23 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P12 | 2015–05-23 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | − |
P13 | 2015–05-24 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P14 | 2015–05-25 | vanA | 769 | r | r | r | r | r | r | r | r | r | r | s | s | s | s | r | + | + |
P15 | 2015–05-28 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | r | r | r | + | − |
P16 | 2015–06-02 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P17 | 2015–06-02 | vanA | 769 | r | r | r | r | r | r | r | r | r | r | s | s | s | s | r | + | + |
P18 | 2015–06-02 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P19 | 2015–06-07 | vanA | 769 | r | r | r | r | r | r | r | r | r | r | s | s | s | s | r | + | + |
P20 | 2015–06-08 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P21 | 2015–06-09 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | r | s | r | r | − | + |
P22 | 2015–06-09 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | r | s | r | r | − | + |
P23 | 2015–06-09 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | − |
P24 | 2015–06-09 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P25 | 2015–06-16 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P26 | 2015–06-16 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P27 | 2015–06-17 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | − | + |
P28 | 2015–06-19 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P29 | 2015–06-23 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P30 | 2015–06-23 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P31 | 2015–07-01 | vanA | 192 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | + | + |
P32 | 2015–07-02 | vanB | 17 | r | r | r | r | r | r | r | r | r | s | s | s | s | r | r | − | + |
P33 | 2015–07-02 | vanB | 80 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P34 | 2015–07-07 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P35 | 2015–07-07 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | + | + |
P36 | 2015–07-12 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P37 | 2015–07-16 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P38 | 2015–07-21 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P39 | 2015–07-21 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P40 | 2015–07-21 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P41 | 2015–07-21 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | + |
P42 | 2015–07-21 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | + | + |
P43 | 2015–07-30 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P44 | 2015–07-30 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | + |
P45 | 2015–07-30 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | − | + |
P46 | 2015–08-06 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P47 | 2015–08-06 | vanB | 192 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P48 | 2015–08-13 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | + |
P49 | 2015–08-20 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P50 | 2015–08-31 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P51 | 2015–09-02 | vanB | 80 | r | r | r | r | r | r | r | r | r | s | i | s | s | s | r | + | + |
P52 | 2015–09-07 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | + |
P53 | 2015–10-08 | vanB | 80 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | + |
P54 | 2015–10-19 | vanB | 80 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | + |
P55 | 2015–10-19 | vanB | N/A | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | − | + |
P56 | 2015–10-26 | vanB | 80 | r | r | r | r | r | r | r | r | r | s | s | s | s | s | r | + | − |
P57 | 2015–11-25 | vanB | N/A | r | r | r | r | r | r | r | r | r | r | s | s | s | s | r | − | + |
P58 | 2015–11-30 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | − | − |
P59 | 2015–12-21 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | + | + |
P60 | 2015–12-21 | vanA | 203 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | + | + |
Pref | 2015–05-15 | vanA | 192 | r | r | r | r | r | r | r | r | r | r | s | s | s | r | r | + | + |
E1 | 2015–05-11 | vanB | 192 | |||||||||||||||||
E2 | 2015–05-11 | vanB | 192 | |||||||||||||||||
E3 | 2015–05-11 | vanB | 192 | |||||||||||||||||
E4 | 2015–05-11 | vanB | 192 | |||||||||||||||||
E5 | 2015–05-11 | vanB | 769 | |||||||||||||||||
E6 | 2015–05-11 | vanA | 192 | |||||||||||||||||
E7 | 2015–05-19 | vanB | 192 | |||||||||||||||||
E8 | 2015–06-02 | vanB | 80 | |||||||||||||||||
E9 | 2015–06-02 | vanB | 192 | |||||||||||||||||
E10 | 2015–06-02 | vanB | 80 | |||||||||||||||||
E11 | 2015–06-02 | vanB | N/A |