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Table 1 Origin and drug susceptibility results of 38 clinical E. coli isolates

From: Whole genome sequencing reveals high clonal diversity of Escherichia coli isolated from patients in a tertiary care hospital in Moshi, Tanzania

Origin of isolate

Drug susceptibility resultsd

Isolate

wardb

specimenc

yeara

AMC

AM

CZ

CAZ

CRO

C

CIP

GM

NA

SXT

4

MW

Stool

2013

S

R

S

S

S

S

S

S

S

R

5

MW

Stool

2013

S

S

S

S

S

S

S

S

S

S

6

MW

Stool

2013

S

S

S

S

S

S

S

S

S

S

10

SW

Swab

2013

R

R

S

S

S

S

R

S

R

S

21

MW

Stool

2013

R

S

S

S

S

S

S

S

S

R

22

MW

Stool

2013

N

N

N

N

N

N

N

N

N

N

30

SW

Swab

2013

S

S

S

S

S

S

S

S

S

S

44

SICU

Swab

2013

S

R

R

R

R

S

R

R

R

R

70

MW

Sputum

2013

R

R

R

R

R

S

R

S

R

R

73

MW

Stool

2013

R

R

R

R

R

S

R

S

R

R

82

MW

Stool

2013

R

R

R

S

R

S

R

S

R

R

97

MW

Stool

2014

N

N

N

N

N

N

N

N

N

N

115

SW

Swab

2014

S

R

R

R

R

S

S

S

S

R

199

MW

Blood

2014

R

R

R

R

R

R

R

R

R

R

203

MW

Stool

2014

R

R

S

S

S

S

R

S

R

R

210

MW

Blood

2014

R

R

R

R

R

S

R

R

R

R

244

MW

Sputum

2014

R

R

R

R

R

S

R

R

R

R

245

MW

Swab

2014

R

R

R

R

R

S

R

R

R

R

247

MW

Blood

2014

R

R

R

S

R

S

R

S

R

R

298

MW

Stool

2014

N

N

N

N

N

N

N

N

N

N

365

SICU

Swab

2014

R

R

R

R

R

S

R

S

R

R

393

MICU

Stool

2015

R

R

R

R

R

S

R

R

R

R

521

MW

Sputum

2014

S

S

S

S

S

S

S

S

R

R

538

SW

Swab

2015

N

N

N

N

N

N

N

N

N

N

554

MW

Stool

2015

N

N

N

N

N

N

N

N

N

N

587

SW

Swab

2015

N

N

N

N

N

N

N

N

N

N

603

MICU

Swab

2015

N

N

N

N

N

N

N

N

N

N

118A

SW

Swab

2014

S

R

S

S

S

S

S

S

S

S

119EC

MW

Stool

2014

S

S

R

R

R

R

S

S

S

S

163A

SW

Swab

2014

S

S

S

S

S

S

S

S

S

S

237C

SW

Swab

2014

N

N

N

N

N

N

N

N

N

N

340B

MW

Sputum

2014

S

S

S

S

S

S

S

S

S

R

431D

SICU

Swab

2015

N

N

N

N

N

N

N

N

N

N

567B

SW

Swab

2015

N

N

N

N

N

N

N

N

N

N

598A

MW

Swab

2015

N

N

N

N

N

N

N

N

N

N

598B

MW

Swab

2015

N

N

N

N

N

N

N

N

N

N

71E

MW

Swab

2013

R

R

R

R

R

S

R

R

R

R

77E

SICU

Swab

2013

R

R

R

R

R

S

R

S

R

S

  1. ayear of collection
  2. b MW Medical ward, SW surgical ward, MICU medical ICU, SICU surgical ICU
  3. cWound or pus swab, diarrhoea or stool
  4. d S Susceptible, R Resistant, N Not tested, AMC Amoxicillin-Clavulanate, AM ampicillin, CZ cefazoline, CAZ ceftazidime, CRO ceftriaxone, C chloramphenicol, CIP ciprofloxacin, GM gentamycin, NA Nalidixic acid, SXT trimethoprim sulphamethoxazole