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Table 6 Combined genotyping pattern of H. pylori strains isolated from different types of raw milk samples

From: Phenotypic analysis of antibiotic resistance and genotypic study of the vacA, cagA, iceA, oipA and babA genotypes of the Helicobacter pylori strains isolated from raw milk

Combined genotyping patterns Distributiona (%)
s1a/cagA+/iceA1/oipA+/babA2+ 13 (19.40)
s1a/cagA+/iceA1/oipA+/babA2- 15 (22.38)
s1a/cagA+/iceA1/oipA−/babA2+ 17 (25.37)
s1a/cagA+/iceA1/oipA−/babA2- 19 (28.35)
s1a/cagA+/iceA2/oipA+/babA2+ 4 (5.97)
s1a/cagA+/iceA2/oipA+/babA2- 5 (7.46)
s1a/cagA+/iceA2/oipA−/babA2+ 6 (8.95)
s1a/cagA+/iceA2/oipA−/babA2- 7 (10.44)
s1a/cagA−/iceA1/oipA+/babA2+ 6 (8.95)
s1a/cagA−/iceA1/oipA+/babA2- 8 (11.94)
s1a/cagA−/iceA1/oipA−/babA2+ 8 (11.94)
s1a/cagA−/iceA1/oipA−/babA2- 10 (14.92)
s1a/cagA−/iceA2/oipA+/babA2+ 2 (2.98)
s1a/cagA−/iceA2/oipA+/babA2- 4 (5.97)
s1a/cagA−/iceA2/oipA−/babA2+ 5 (7.46)
s1a/cagA−/iceA2/oipA−/babA2- 5 (7.46)
s1b/cagA+/iceA1/oipA+/babA2+ 9 (13.43)
s1b/cagA+/iceA1/oipA+/babA2- 11 (16.41)
s1b/cagA+/iceA1/oipA−/babA2+ 12 (17.91)
s1b/cagA+/iceA1/oipA−/babA2- 14 (20.89)
s1b/cagA+/iceA2/oipA+/babA2+ 2 (2.98)
s1b/cagA+/iceA2/oipA+/babA2- 3 (4.47)
s1b/cagA+/iceA2/oipA−/babA2+ 4 (5.97)
s1b/cagA+/iceA2/oipA−/babA2- 5 (7.46)
s1b/cagA−/iceA1/oipA+/babA2+ 1 (1.49)
s1b/cagA−/iceA1/oipA+/babA2- 1 (1.49)
s1b/cagA−/iceA1/oipA−/babA2+ 2 (2.98)
s1b/cagA−/iceA1/oipA−/babA2- 2 (2.98)
s1b/cagA−/iceA2/oipA+/babA2+ –
s1b/cagA−/iceA2/oipA+/babA2- 1 (1.49)
s1b/cagA−/iceA2/oipA−/babA2+ 2 (2.98)
s1b/cagA−/iceA2/oipA−/babA2- 2 (2.98)
s1c/cagA+/iceA1/oipA+/babA2+ –
s1c/cagA+/iceA1/oipA+/babA2- –
s1c/cagA+/iceA1/oipA−/babA2+ 1 (1.49)
s1c/cagA+/iceA1/oipA−/babA2- 2 (2.98)
s1c/cagA+/iceA2/oipA+/babA2+ –
s1c/cagA+/iceA2/oipA+/babA2- –
s1c/cagA+/iceA2/oipA−/babA2+ –
s1c/cagA+/iceA2/oipA−/babA2- 1 (1.49)
s1c/cagA−/iceA1/oipA+/babA2+ –
s1c/cagA−/iceA1/oipA+/babA2- –
s1c/cagA−/iceA1/oipA−/babA2+ –
s1c/cagA−/iceA1/oipA−/babA2- 1 (1.49)
s1c/cagA−/iceA2/oipA+/babA2+ –
s1c/cagA−/iceA2/oipA+/babA2- –
s1c/cagA−/iceA2/oipA−/babA2+ –
s1c/cagA−/iceA2/oipA−/babA2- –
s2/cagA+/iceA1/oipA+/babA2+ 12 (17.91)
s2/cagA+/iceA1/oipA+/babA2- 13 (19.40)
s2/cagA+/iceA1/oipA−/babA2+ 16 (23.88)
s2/cagA+/iceA1/oipA−/babA2- 18 (26.86)
s2/cagA+/iceA2/oipA+/babA2+ 3 (4.47)
s2/cagA+/iceA2/oipA+/babA2- 4 (5.97)
s2/cagA+/iceA2/oipA−/babA2+ 6 (8.95)
s2/cagA+/iceA2/oipA−/babA2- 6 (8.95)
s2/cagA−/iceA1/oipA+/babA2+ 5 (7.46)
s2/cagA−/iceA1/oipA+/babA2- 7 (10.44)
s2/cagA−/iceA1/oipA−/babA2+ 9 (13.43)
s2/cagA−/iceA1/oipA−/babA2- 10 (14.92)
s2/cagA−/iceA2/oipA+/babA2+ 1 (1.49)
s2/cagA−/iceA2/oipA+/babA2- 3 (4.47)
s2/cagA−/iceA2/oipA−/babA2+ 4 (5.97)
s2/cagA−/iceA2/oipA−/babA2- 5 (7.46)
m1a/cagA+/iceA1/oipA+/babA2+ 12 (17.91)
m1a/cagA+/iceA1/oipA+/babA2- 14 (20.89)
m1a/cagA+/iceA1/oipA−/babA2+ 17 (25.37)
m1a/cagA+/iceA1/oipA−/babA2- 19 (28.35)
m1a/cagA+/iceA2/oipA+/babA2+ 4 (5.97)
m1a/cagA+/iceA2/oipA+/babA2- 5 (7.46)
m1a/cagA+/iceA2/oipA−/babA2+ 6 (8.95)
m1a/cagA+/iceA2/oipA−/babA2- 6 (8.95)
m1a/cagA−/iceA1/oipA+/babA2+ 6 (8.95)
m1a/cagA−/iceA1/oipA+/babA2- 7 (10.44)
m1a/cagA−/iceA1/oipA−/babA2+ 8 (11.94)
m1a/cagA−/iceA1/oipA−/babA2- 10 (14.92)
m1a/cagA−/iceA2/oipA+/babA2+ 2 (2.98)
m1a/cagA−/iceA2/oipA+/babA2- 3 (4.47)
m1a/cagA−/iceA2/oipA−/babA2+ 5 (7.46)
m1a/cagA−/iceA2/oipA−/babA2- 5 (7.46)
m1b/cagA+/iceA1/oipA+/babA2+ 8 (11.94)
m1b/cagA+/iceA1/oipA+/babA2- 10 (14.92)
m1b/cagA+/iceA1/oipA−/babA2+ 10 (14.92)
m1b/cagA+/iceA1/oipA−/babA2- 13 (19.40)
m1b/cagA+/iceA2/oipA+/babA2+ 2 (2.98)
m1b/cagA+/iceA2/oipA+/babA2- 3 (4.47)
m1b/cagA+/iceA2/oipA−/babA2+ 4 (5.97)
m1b/cagA+/iceA2/oipA−/babA2- 4 (5.97)
m1b/cagA−/iceA1/oipA+/babA2+ –
m1b/cagA−/iceA1/oipA+/babA2- 1 (1.49)
m1b/cagA−/iceA1/oipA−/babA2+ 1 (1.49)
m1b/cagA−/iceA1/oipA−/babA2- 2 (2.98)
s1b/cagA−/iceA2/oipA+/babA2+ –
m1b/cagA−/iceA2/oipA+/babA2- 1 (1.49)
m1b/cagA−/iceA2/oipA−/babA2+ 2 (2.98)
m1b/cagA−/iceA2/oipA−/babA2- 2 (2.98)
m2/cagA+/iceA1/oipA+/babA2+ 11 (16.41)
m2/cagA+/iceA1/oipA+/babA2- 13 (19.40)
m2/cagA+/iceA1/oipA−/babA2+ 15 (22.38)
m2/cagA+/iceA1/oipA−/babA2- 18 (26.86)
m2/cagA+/iceA2/oipA+/babA2+ 2 (2.98)
m2/cagA+/iceA2/oipA+/babA2- 4 (5.97)
m2/cagA+/iceA2/oipA−/babA2+ 5 (7.46)
m2/cagA+/iceA2/oipA−/babA2- 6 (8.95)
m2/cagA−/iceA1/oipA+/babA2+ 3 (4.47)
m2/cagA−/iceA1/oipA+/babA2- 6 (8.95)
m2/cagA−/iceA1/oipA−/babA2+ 8 (11.94)
m2/cagA−/iceA1/oipA−/babA2- 10 (14.92)
m2/cagA−/iceA2/oipA+/babA2+ 1 (1.49)
m2/cagA−/iceA2/oipA+/babA2- 3 (4.47)
m2/cagA−/iceA2/oipA−/babA2+ 3 (4.47)
m2/cagA−/iceA2/oipA−/babA2- 5 (7.46)
  1. aDistribution was achieved based on the total numbers of 67 H. pylori isolates
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Antimicrobial Resistance & Infection Control

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