From: The nature and epidemiology of OqxAB, a multidrug efflux pump
References | Year(s) of isolates collection | Geographic area | Sample source | Percentage of oqxAB carring isolates (no. of isolates) | Resistance phenotype(s) | Descriptions |
---|---|---|---|---|---|---|
[27] | 1995–1998 | Danmark, Swedish | Swine | 11.84% (27/228) | OLA | oqxAB operon was situated on pOLA52 plasmid in most strains. |
[17] | 2002 | Guangdong, China | Swine, chicken, environment, farmworker | Animals: E. coli: 39.8% (39/98), environment: E. coli:43.9% (18/41), farmworkers: E. coli:30.3% (10/33) | MEQ, OLA, CHL, ENR, CIP, AMP, KAN, TET, SXT | oqxAB was associated with IS26 and was carried on the 43- to 115-kb IncF transferable plasmid. |
[31] | 2012–2014 | Zhengzhou, China | Dog, cats, human | Dogs: E. coli:58.5% (62/106), cats: E. coli:56.25% (36/64), human: E. coli:42.0% (42/100) | OLA, MEQ, CIP, TET, FFC | Several oqxAB-positive isolates have high similarity and the oqxAB gene was primarily located on plasmids. |
[32] | 1970s-2013 | North and South China | Chicken, pig, duck, goose | E. coli:28.7% (322/1123) | MEQ | IS26-flanked Tn6010 element was prone to excision via IS26-mediated recombination. |
[40] | 2011–2013 | Guangdong, China | Pig, chicken, retail meat, humans | Animals: E. coli: 33.8% (172/509), food: E. coli:17.3% (60/346), human: E. coli:18.1% (90/498) | NEO, APR, FFC, OLA, TET, SXT | oqxAB was located on plasmids belonging to IncN1-F33:A-:B-, IncHI2/ST3, F-:A18:B-, F-:A-:B54 |
[41] | 2010–2011 | China | Human | E. coli:3.8% (23/590) | CIP, LVX | oqxB20 and oqxB29 were identified. |
[43] | 2001–2015 | Taiwan, China | Human | E. coli:6.05% (15/248) | CIP, LVX | oqxAB was located on plasmid and successfully transferred to E. coli C600 by conjugation. |
[44] | 2008–2010 | Ujjain, India | Hospital wastewater | E. coli:1.05% (2/190) | CTX, CAZ, CIP, OFX | First paper reports the detection of oqxAB-carring E.coli from hospital wastewater in India |
[45] | 1993–2010 | China | Human, animals, environment | Human: E. coli:5.2% (16/307), chicken: E. coli:19.8% (76/384), pigs: E. coli:51% (101/198), environment: E. coli: 20.5% (9/44) | AMP, TET, SXT, CHL, STR, CIP | First report of oqxAB-positive isolates from ducks and geese and as early as 1994 from chickens. |
[48] | 2004–2011 | Guangdong, Anhui, Guangxi, Henan, Jiangsu, Sichuan, Fujian, Jiangxi, Beijing, China | Pigs, chickens and ducks), companion animals, human, retail meat | Pig: E. coli:55.7% (280/503), chicken: E. coli:25.8% (127/493), duck: E. coli:40.6% (109/389), pet: E. coli:10% (35/353), food: E. coli: 16.2% (57/352), human: E. coli:7.2% (15/207) | CIP | 43.6% of the E. coli harbored at least one PMQR gene. The most common PMQR gene was oqxAB (29.3%), followed by qnr (13.6%), aac(6′)-Ib-cr (11.6%), and qepA (3.3%). |
[49] | 2002–2010 | Guangdong, China | Ducks, chickens, pigs | E. coli:43.43% (215/495) | CIP, ENR, LVX, NAL | Prevalence of oqxAB had significant Spearman correlation coefficients with MICs of quinolones. |
[50] | 2011 | Beijing, Shanxi, Guangdong, Inner Mogolia, China | Chicken carcasses, ground pork | E. coli:62.26% (66/106) | CTX, CIP,CHL, TET, GEN, SXT, AMP, CAZ | 68.2% of the cefotaxime and ciprofloxacin coresistant E. coli isolates carried at least one PMQR gene and eight subtypes of blaCTX-M were identified. |
[46] | 2006–2008 | Northern Italy | Farm and wild lagomorphs | E. coli:15% (17/113) | TET, STR, NAL, SXT, CHL | Seven out of 17 strains were carried from three to six different plasmid types, such as IncF, IncHI1, IncI1, IncN, IncP, IncX1, IncY, and ColE. |
[16] | 2002–2012 | Guangdong, China | Duck, chicken, geese and pig | E. coli:47.12% (328/696) | AMP, CHL,FFC, TET, GEN, KAN, CTI, DOX | oqxAB, blaCTX-M and floR were co-transferred on F33:A-: B- and HI2 plasmids in E. coli. |
[19] | 1998–2006 | Seoul Korea | Human | E. coli:0.4% (1/261) E. cloacae: 4.6% (3/65), | OLA, CIP | This is the first report of the presence of an oqxAB-containing plasmid in a human isolate of E. coli. |
[14] | 2010 | Shanghai China | Human | E. coli: 6.6% (9/136), | NAL, CIP, NOR, LVX, OLA, TMP, CHL, TET | Variants of oqxA2, oqxB2 and oqxB3 were identified in two E. coli strains. |