|
A
|
Day 0
|
Allograft perfusion fluid
|
Cluster of identical isolates, 0 alleles of difference. 1 allele of difference to P6
|
|
P1
|
Day +2
|
Blood culture, peripheral
|
|
P2
|
Day +2
|
Blood culture, central venous line
|
|
P3
|
Day +2
|
Swab, intra-abdominal
|
|
P4
|
Day +3
|
Swab, intra-abdominal
|
|
P5
|
Day +3
|
Swab, intra-abdominal
|
|
P7
|
Day +3
|
Swab, gallbladder
|
|
P8
|
Day +3
|
Swab, duodenum
|
|
P9
|
Day +3
|
Swab, stomach
|
|
P6
|
Day +3
|
Swab, subcutaneus tissue
|
1 allele of difference to cluster
|
|
R
|
–
|
Reference genome, Enterococcus faecium Aus0004 [18]
|
288 alleles of difference to cluster
|
