Primer Pair | Amplified product | Sequence (5′ to 3′) | Amplicom size | Anneling temperature | References |
---|---|---|---|---|---|
gyrA-F | gyrA | ATG GCT GAA TTA CCT CAA TC | 398 bp | 55°C | 13 |
gyrA-R | GTG TGA TTT TAG TCA TAC GC | ||||
gyrB-F | gyrB | CAGCGTTAGATGTAGCAAGC | 680 bp | 55°C | 17 |
gyrB-R | CGATTTTGTGATATCTTGCTTTCG | ||||
grlA-F | grlA | CAG TCG GTG ATG TTA TTG GT | 469 bp | 55°C | 13 |
grlA-R | CCT TGA ATA ATA CCA CCA GT | ||||
grlB-F | grlB | GIG AAG CIG CAC GTA A | 363 bp | 50°C | 13 |
grlB-R | TCI GTA TCI GCA TCA GTC AT | ||||
ermA-F | erm(A) | TAT CTT ATC GTT GAG AAG GGA TT | 138 bp | 55°C | 5 |
ermA-R | CTA CAC TTG GCT TAG GAT GAA A | ||||
ermC-F | erm(C) | CTT GTT GAT CAC GAT AAT TTC C | 189 bp | 55°C | 5 |
ermCR | ATC TTT TAG CAA ACC CGT ATT C | ||||
msrA-F | msrA | TCC AAT CAT TGC ACA AAA TC | 162 bp | 55°C | 5 |
msrA-R | AAT TCC CTC TAT TTG GTG GT | ||||
aac(6′)-aph(2″)F | aac(6′)-aph(2″) | TTG GGA AGA TGA AGT TTT TAG A | 173 bp | 55°C | 5 |
aac(6′)-aph(2″)R | CCT TTA CTC CAA TAA TTT GGC T | ||||
tetK-F | tetK | GTA GCG ACA ATA GGT AAT AGT | 360 bp | 55°C | 6 |
tetK-R | GTA GTG ACA ATA AAC CTC CTA | ||||
fusB-F | fusB | ATT CAA TCG GAA AAC TAT AAT GAT A | 292 bp | 60°C | 21 |
fusB-R | TTA TAT ATT TCC GAT TTG ATG CAA G | ||||
16srRNA-F | 16S rRNA | GGA GGA AGG TGG GGA TGA CG | 245 bp | 55°C | 5 |
16srRNA-R | ATG GTG TGA CGG GCG GTG TG | ||||
arcC-F | arcC | TTGATTCACCAGCGCGTATTGTC | 450 bp | 55°C | 10 |
arcC-R | AGGTATCTGCTTCAATCAGCG | ||||
aroE-F | aroE | ATCGGAAATCCTATTTCACATTC | 450 bp | 55°C | 10 |
aroE-R | GGTGTTGTATTAATAACGATATC | ||||
glpF-F | glpF | CTAGGAACTGCAATCTTAATCC | 450 bp | 55°C | 10 |
glpF-R | TGGTAAAATCGCATGTCCAATTC | ||||
gmk-F | gmk | ATCGTTTTATCGGGACCATC | 450 bp | 55°C | 10 |
gmk-R | TCATTAACTACAACGTAATCGTA | ||||
pta-F | pta | GTTAAAATCGTATTACCTGAAGG | 450 bp | 55°C | 10 |
pta-R | GACCCTTTTGTTGAAAAGCTTAA | ||||
tpi-F | tpi | TCGTTCATTCTGAACGTCGTGAA | 450 bp | 55°C | 10 |
tpi-R | TTTGCACCTTCTAACAATTGTAC | ||||
yqiL-F | yqiL | CAGCATACAGGACACCTATTGGC | 450 bp | 55°C | 10 |
yqiL-R | CGTTGAGGAATCGATACTGGAAC |