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Table 3 Primer sequences, genes for beta-lactamase and the expected amplicon sizes

From: Antibiogram and beta-lactamase genes among cefotaxime resistant E. coli from wastewater treatment plant

Group

Gene name

Primer sequence (5′–3′)

Expected amplicon size (bp)

ESBLS genes

blaTEM

GTCGCCGCATACACTATTCTCA

258

CGCTCGTCGTTTGGTATGG

blaCTX-M

CGGGAGGCAGACTGGGTGT

381

TCGGCTCGGTACGGTCGA

blaSHV

GCCTTGACCGCTGGGAAAC

319

GGCGTATCCCGCAGATAAAT

Carbapenemase genes

blaVIM

GATGGTGTTTGGTCGCATA

390

CGAATGCGCAGC

blaOXA-1

TTCTGTTGTTTGGGTTTCGC

190

ACGCAGGAATTGAATTTGTTC

blaKPC-2

GCTTCCCACTGTGCAGCTCATTC

213

CGCCCAACTCCTCAGCAACAATTG

blaNDM-1

GGTGCATGCCCGGTGAAATC

660

ATGCTGGCCTTGGGGAACG