Fig. 3

Comparison of genome sequences of Escherichia coli isolates (A), Acinetobacter baumannii isolates (B) and Pseudomonas aeruginosa isolates (C). (a) Comparison of genome sequences of four E. coli isolates. The unassembled sequences of E. coli isolates 43E, 73E, 77E, and 95E were aligned and compared to the complete genome sequence of E. coli K-12.MG1655 (accession number: NC_000913), E. coli EC958 (accession number: HG941718) and E. coli H105 (accession number: CP021454) strains. (b) Comparison of genome sequences of six A. baumannii isolates with the same POT code of 104–12-10 and A. ursingii isolate 56C. The unassembled sequences of these A. baumannii isolates were aligned and compared to the complete genome sequence of A. baumannii ATCC17987 strain (accession number: NZ_CP018664). (c) Comparison of genome sequences of P. aeruginosa NCGM2.S1 (type E), PA058447 (type F), 71E, and PAO1 strains. The unassembled sequences of P. aeruginosa isolate 71E and PA058447 strain were aligned and compared to the complete genome sequence of P. aeruginosa NCGM2.S1 (accession number: AP012280) and PAO1 (accession number: NC_002516) strains