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Table 3 MLST, serotype, Fim type, and AMR genes of the isolates analysed by whole genome sequences

From: Oral colonisation by antimicrobial-resistant Gram-negative bacteria among long-term care facility residents: prevalence, risk factors, and molecular epidemiology

 E. coli 43EE. coli 73EE. coli 77EE. coli 95EA. baumannii 13C, 41C, 45C, 50E-B, 51E, 52EA. ursingii 56CP. aeruginosa 71E
MLSTST131ST131ST131ST131ST130 ST235
SerotypeO25:H4O25:H4O25:H4O25:H4   
FimH typefimH30fimH30fimH30fimH30   
Beta-lactamblaCTX-M-27 (100%)blaCTX-M-27 (100%)blaCTX-M-27 (100%)blaCTX-M-14 (100%)
blaTEM-1B (100%)
blaADC-166 (97.74%)
blaOXA-430 (99.88%)
blaCARB-2 (100%)blaPDC-35 (100%)
blaOXA-50 (99.87%)
blaIMP-1 (100%)
blaTEM-1B (100%)
Aminoglycosideaph(3″)-Ib (100%)
aph(6)-Id (100%)
aadA5 (100%)
aph(3″)-Ib (100%)
aph(6)-Id (100%)
aph(3″)-Ib (100%)
aph(6)-Id (100%)
aph(3″)-Ib (100%)
aadA5 (100%)
aac(3)-IId (99.88%)
aac(6′)-Ib3 (99.82%)
 aac(6′)-Ib3 (99.82%)
aph(3″)-Ib (99.88%)
aph(3′)-Ia (100%)
aph(6)-Id (100%)
aac(6′)-Iae (100%)
aph(3′)-II (100%)
aadA1 (100%)
Fluoroquinolone   aac(6′)-Ib-cr (99.49%) aac(6′)-Ib-cr (99.42%) 
Fosfomycin      fosA (100%)
MLS (Macrolide, Lincosamide, Streptogramin B)mdf(A) (97.81%)
mph(A) (100%)
mdf(A) (97.81%)mdf(A) (97.81%)
mph(A) (100%)
mph(A) (100%)
mdf(A) (97.81%)
 mrs(E) (100%)
mph(E) (100%)
 
Phenicol   cmlA1 (99.92%) floR (98.35%)catB7 (100%)
Rifampicin     ARR-3 (100%) 
Sulfonamidesul2 (100%)
sul1 (100%)
sul2 (100%)sul2 (100%)
sul1 (100%)
sul2 (100%)
sul1 (100%)
 sul2 (100%)
sul1 (100%)
sul1 (100%)
Tetracyclinetet(A) (100%)tet(A) (100%)tet(A) (100%)  tet(39) (99.91%) 
Trimethoprim   dfrA17 (100%) dfrA19 (100%)