Table 1 List of 28 Bcg strains isolated during clinical diagnostic and surveillance efforts
Patient(P)/Environ-mental (E) sample number | Taxon name (BTyper3 based) | MLST ST | Collection date | Specimen | Toxin profile |
|---|---|---|---|---|---|
P1 | B. mosaicus | 127 | 7/2020 | Blood culture | F |
P3 | B. mosaicus | 127 | 6/2021 | Wound swab | F |
P4 | B. mosaicus | 127 | 8/2020 | Abdomen swab | F |
P9 | B. mosaicus | 127 | 8/2020 | Nasal swab | F |
P10 | B. mosaicus | 127 | 8/2020 | Nasal swab | F |
P11 | B. mosaicus | 127 | 3/2021 | Skin swab | F |
P17 | B. mosaicus | 127 | 8/2021 | Nasal swab | F |
P18 | B. mosaicus | 127 | 8/2021 | Anal swab | F |
E5 | B. mosaicus | 127 | 8/2020 | Swab room sanitizer | F |
E6 | B. mosaicus | 127 | 8/2020 | Swab bottle warmer | F |
E7 | B. mosaicus | 127 | 8/2020 | Swab room | F |
E8 | B. mosaicus | 127 | 8/2020 | Swab screen ventilator | F |
E9 | B. mosaicus | 127 | 8/2020 | Swab room | F |
P6 | B. mosaicus subsp. cereus | 1359 | 7/2021 | Skin swab | D |
P14 | B. mosaicus subsp. cereus | 26 | 10/2021 | Nasal swab | F |
E1* | B. mosaicus subsp. cereus | 144 | 7/2020 | Swab environment | F |
E2* | B. mosaicus subsp. cereus | 164 | 7/2020 | Swab environment | F |
E3* | B. mosaicus subsp. cereus | 26 | 7/2020 | Swab environment | F |
E4* | B. mosaicus subsp. cereus | 144 | 7/2020 | Swab environment | F |
P7 | B. mosaicus subsp. cereus biovar Emeticus | 26 | 3/2021 | Anal swab | E |
P13 | B. mosaicus subsp. cereus biovar Emeticus | 26 | 9/2021 | Umbilical swab | E |
P16 | B. mosaicus subsp. cereus biovar Emeticus | 26 | 11/2021 | Nasal swab | E |
P2 | B. cereus s.s | 1331 | 9/2020 | Abdomen swab | A |
P5 | B. cereus s.s | 3228 | 6/2020 | Nasal swab | A |
P12 | B. cereus s.s | 4 | 8/2021 | Anal swab | A |
P15 | B. cereus s.s | 177 | 10/2021 | Nasal swab | A |
P19 | B. cereus s.s | 3230 | 8/2021 | Anal swab | A |
P8 | B. cereus s.s. biovar Thuringiensis | 3229 | 2/2021 | Anal swab | A |