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Table 2 Profiles obtained by ERIC-PCR, virulence factors and antimicrobial resistance pattern in A. baumannii strains isolated from animal origins

From: Genotyping and distribution of putative virulence factors and antibiotic resistance genes of Acinetobacter baumannii strains isolated from raw meat

ERIC typesa Numbers and source of strains Antibiotic resistance phenotypes Antibiotic resistance genes ®
I 19,22 (Chicken meat) SXT25, TE30, F300 aadA1, sul1, tetB, sim, oxa-58-like cnf1, csgA, fimH
II 20 (Chicken meat) GM10, TE30, TMP5, CIP5, C30, F300 sul1, tetA, tetB, dfrA1, qnr, cat1, vim ibeA, sfa/focDE, afa/draBC
III 21 (Chicken meat) CL30, TE30, TMP5, E15 tetB, dfrA1, qnr, cmlA,
oxa-23-like
kpsMTII, PAI, ibeA, traT, afa/draBC, cnf2, csgA, fyuA, fimH
IV 12,15 (Chicken meat) S10, GM10, SXT25, TE30, TMP5 aadA1, aac(3)-IV, sul1, blaSHV, tetA, dfrA1 kpsMTII, sfa/focDE, cnf1, iutA
V 18 (Turkey meat) TOB10, CL30, CAZ30, TE30, AZM15 aac(3)-IV, blaSHV, ClTM, tetA, tetB cvaC, fimH
VI 16 (Ovine meat) GM10, AK30, SXT25, CL30, CAZ30, TE30, TMP5, CIP5, LEV5, MEM10, C30, F300, E15 aadA1, aac(3)-IV, sul1, blaSHV, ClTM, tetA, tetB, dfrA1, cat1, cmlA, sim, oxa-51-like, oxa-23-like kpsMTII, ibeA, papC, papGII, papGIII, traT, afa/draBC, cnf1, cnf2, csgA, iutA, fimH
VII 17 (Bovine meat) S10, CAZ30, TE30, TMP5, IPM10, RA5 aadA1, aac(3)-IV, ClTM, dfrA1, imp PAI, papC, papGIII, traT, afa/draBC, cnf1, cnf2, csgA, cvaA, iutA, fyuA, fimH
VIII 7 (Bovine meat) F300, RA5 aadA1, ClTM, tetA, tetB, dfrA1, cat1, imp,
oxa-51-like, oxa-24-like
kpsMTII, PAI, papC, papGIII, traT, afa/draBC, cnf1, cnf2, csgA, iutA, fyuA, fimH
IX 14 (Chicken meat)
6 (Bovine meat)
GM10, AK30, TOB10, CL30, TE30, CIP5, C30 aac(3)-IV, sul1, blaSHV, tetA, tetB, dfrA1 papGII, papGIII, afa/draBC, cnf1, cnf2, cvaC, fyuA, fimH
X 9 (Camel meat) S10, AZM15 aadA1, tetA PAI, papC, papGII, sfa/focDE, afa/draBC, csgA, cvaC
XI 11 (Camel meat) GM10, TOB10, SXT25, TE30, C30, RA5 aadA1, aac(3)-IV, sul1, tetA, tetB, cmlA ibeA, papGII, sfa/focDE, traT, afa/draBC, cnf2, csgA, cvaC, fimH
XII 8 (Chicken meat) S10, AK30, CAZ30, TE30, LEV5, IPM10, C30 sul1, ClTM, tetA, tetB, qnr, cat1, cmlA, vim, oxa-51-like, oxa-23-like,
oxa-24-like
PAI, ibeA, papGII, sfa/focDE, cnf2, iutA, fimH
XIII 1,3 (Chicken meat) SXT25, TE30, TMP5, CIP5, MEM10, E15 aac(3)-IV, sul1, ClTM, tetA, tetB, dfrA1 cnf2, csgA, iutA, fimH
XIV 13 (Turkey meat) TOB10, TE30, TMP5, CIP5, LEV5, E15 aadA1, tetA, tetB, dfrA1, oxa-51-like,
oxa-24-like
ibeA, papC, sfa/focDE, fimH
XV 5 (Turkey meat)
4 (Bovine meat)
GM10, TOB10, SXT25, TE30, TEP5, E15 aac(3)-IV, sul1, tetA, tetB afa/draBC, cnf1, cnf2, csgA, cvaC, fimH
XVI 2 (Camel meat)
10 (Ovine meat)
S10, GM10, TE30, TMP5 aac(3)-IV, tetA, dfrA1,
oxa-58-like
sfa/focDE, afa/draBC, cnf1, csgA, cvaC, iutA, fyuA, fimH
  1. aIn this table: S10 = Streptomycin, GM10 = Gentamicin, AK30 = Amikacin, TOB10 = Tobramycin, SXT25 = Trimethoprim/sulphamethoxazole, CL30 = Cephalothin, CAZ30 = Ceftazidime, TE30 = Tetracycline, TMP5 = Trimethoprim, CIP5 = Ciprofloxacin, LEV5 = Levofloxacin, IPM10 = Imipenem, MEM10 = Meropenem, C30 = Chloramphenicol, F300 = Nitrofurantoin, AZM15 = Azithromycin, RA5 = Rifampin, E15 = Erythromycin