Table 2 Profiles obtained by ERIC-PCR, virulence factors and antimicrobial resistance pattern in A. baumannii strains isolated from animal origins
ERIC typesa | Numbers and source of strains | Antibiotic resistance phenotypes | Antibiotic resistance genes | ® |
|---|---|---|---|---|
I | 19,22 (Chicken meat) | SXT25, TE30, F300 | aadA1, sul1, tetB, sim, oxa-58-like | cnf1, csgA, fimH |
II | 20 (Chicken meat) | GM10, TE30, TMP5, CIP5, C30, F300 | sul1, tetA, tetB, dfrA1, qnr, cat1, vim | ibeA, sfa/focDE, afa/draBC |
III | 21 (Chicken meat) | CL30, TE30, TMP5, E15 | tetB, dfrA1, qnr, cmlA, oxa-23-like | kpsMTII, PAI, ibeA, traT, afa/draBC, cnf2, csgA, fyuA, fimH |
IV | 12,15 (Chicken meat) | S10, GM10, SXT25, TE30, TMP5 | aadA1, aac(3)-IV, sul1, blaSHV, tetA, dfrA1 | kpsMTII, sfa/focDE, cnf1, iutA |
V | 18 (Turkey meat) | TOB10, CL30, CAZ30, TE30, AZM15 | aac(3)-IV, blaSHV, ClTM, tetA, tetB | cvaC, fimH |
VI | 16 (Ovine meat) | GM10, AK30, SXT25, CL30, CAZ30, TE30, TMP5, CIP5, LEV5, MEM10, C30, F300, E15 | aadA1, aac(3)-IV, sul1, blaSHV, ClTM, tetA, tetB, dfrA1, cat1, cmlA, sim, oxa-51-like, oxa-23-like | kpsMTII, ibeA, papC, papGII, papGIII, traT, afa/draBC, cnf1, cnf2, csgA, iutA, fimH |
VII | 17 (Bovine meat) | S10, CAZ30, TE30, TMP5, IPM10, RA5 | aadA1, aac(3)-IV, ClTM, dfrA1, imp | PAI, papC, papGIII, traT, afa/draBC, cnf1, cnf2, csgA, cvaA, iutA, fyuA, fimH |
VIII | 7 (Bovine meat) | F300, RA5 | aadA1, ClTM, tetA, tetB, dfrA1, cat1, imp, oxa-51-like, oxa-24-like | kpsMTII, PAI, papC, papGIII, traT, afa/draBC, cnf1, cnf2, csgA, iutA, fyuA, fimH |
IX | 14 (Chicken meat) 6 (Bovine meat) | GM10, AK30, TOB10, CL30, TE30, CIP5, C30 | aac(3)-IV, sul1, blaSHV, tetA, tetB, dfrA1 | papGII, papGIII, afa/draBC, cnf1, cnf2, cvaC, fyuA, fimH |
X | 9 (Camel meat) | S10, AZM15 | aadA1, tetA | PAI, papC, papGII, sfa/focDE, afa/draBC, csgA, cvaC |
XI | 11 (Camel meat) | GM10, TOB10, SXT25, TE30, C30, RA5 | aadA1, aac(3)-IV, sul1, tetA, tetB, cmlA | ibeA, papGII, sfa/focDE, traT, afa/draBC, cnf2, csgA, cvaC, fimH |
XII | 8 (Chicken meat) | S10, AK30, CAZ30, TE30, LEV5, IPM10, C30 | sul1, ClTM, tetA, tetB, qnr, cat1, cmlA, vim, oxa-51-like, oxa-23-like, oxa-24-like | PAI, ibeA, papGII, sfa/focDE, cnf2, iutA, fimH |
XIII | 1,3 (Chicken meat) | SXT25, TE30, TMP5, CIP5, MEM10, E15 | aac(3)-IV, sul1, ClTM, tetA, tetB, dfrA1 | cnf2, csgA, iutA, fimH |
XIV | 13 (Turkey meat) | TOB10, TE30, TMP5, CIP5, LEV5, E15 | aadA1, tetA, tetB, dfrA1, oxa-51-like, oxa-24-like | ibeA, papC, sfa/focDE, fimH |
XV | 5 (Turkey meat) 4 (Bovine meat) | GM10, TOB10, SXT25, TE30, TEP5, E15 | aac(3)-IV, sul1, tetA, tetB | afa/draBC, cnf1, cnf2, csgA, cvaC, fimH |
XVI | 2 (Camel meat) 10 (Ovine meat) | S10, GM10, TE30, TMP5 | aac(3)-IV, tetA, dfrA1, oxa-58-like | sfa/focDE, afa/draBC, cnf1, csgA, cvaC, iutA, fyuA, fimH |